hisat2 (2.1.0-3) unstable; urgency=medium

  [ Steffen Moeller ]
  * Separated series of .py scripts and modules into separate
    python3-hisat2 package.

  [ Saira Hussain ]
  * Add autopkgtest

  [ Andreas Tille ]
  * Install hisat2_extract_splice_sites.py
  * Recommends: bcftools, samtools

  [ Michael R. Crusoe ]
  * Include SIMD everywhere headers and enable building on all architectures.
  * debhelper-compat 12
  * Remove trailing whitespace in debian/control
  * Ported Python scripts to Python 3 using 2to3. Closes: #943125

 -- Michael R. Crusoe <michael.crusoe@gmail.com>  Mon, 30 Dec 2019 20:08:00 +0100

hisat2 (2.1.0-2) unstable; urgency=medium

  * Team upload.
  * debhelper 11
  * Point Vcs fields to salsa.debian.org
  * Standards-Version: 4.2.1
  * Fix wrong path for Perl interpreter
  * Do not parse d/changelog

 -- Andreas Tille <tille@debian.org>  Mon, 24 Sep 2018 11:52:06 +0200

hisat2 (2.1.0-1) unstable; urgency=medium

  * Team upload

  [ Steffen Moeller ]
  * debian/upstream/metadata: Added ref to OMICtools

  [ Andreas Tille ]
  * New upstream version
  * Standards-Version: 4.1.0 (no changes needed)

 -- Andreas Tille <tille@debian.org>  Mon, 04 Sep 2017 14:49:40 +0200

hisat2 (2.0.5-1) unstable; urgency=medium

  * Team upload.
  * New upstream version
  * Architecture: amd64 kfreebsd-amd64
    Closes: #834862, #834863
  * d/watch:
     - version=4
     - xz compression
  * debhelper 10

 -- Andreas Tille <tille@debian.org>  Fri, 09 Dec 2016 13:45:26 +0100

hisat2 (2.0.4-2) unstable; urgency=medium

  * Team upload.
  * Fix Vcs-Git.
  * Fix build on kFreeBSD. Thanks to Steven Chamberlain for the patch.
    Closes: #834864
  * Make build reproducible.
    - Set C(XX,PP)FLAGS to make sure -fdebug-prefix-map is set.
    - Set TZ=UTC.
  * Remove arch-restrictive compiler flags.
    Closes: #834862

 -- Sascha Steinbiss <satta@debian.org>  Thu, 25 Aug 2016 15:46:42 +0000

hisat2 (2.0.4-1) unstable; urgency=medium

  * Initial release. (Closes: #834592)

 -- Michael R. Crusoe <michael.crusoe@gmail.com>  Wed, 17 Aug 2016 05:15:40 -0700
