\indexentry{Installing XMDS2|hyperpage}{2}
\indexentry{Installers - linux|hyperpage}{3}
\indexentry{Installers - Max OS X|hyperpage}{4}
\indexentry{Installing via source|hyperpage}{4}
\indexentry{Tutorial|hyperpage}{7}
\indexentry{Exporting data|hyperpage}{11}
\indexentry{Examples|hyperpage}{14}
\indexentry{Nonlinear Schroedinger equation|hyperpage}{15}
\indexentry{Kubo oscillator|hyperpage}{19}
\indexentry{Driver examples!multi-path|hyperpage}{21}
\indexentry{Noise vector example|hyperpage}{21}
\indexentry{Fibre noise|hyperpage}{22}
\indexentry{Multi-path MPI|hyperpage}{25}
\indexentry{Driver examples!mpi-multi-path|hyperpage}{25}
\indexentry{Integer dimensions|hyperpage}{26}
\indexentry{Distributed MPI|hyperpage}{31}
\indexentry{MPI|hyperpage}{31}
\indexentry{Driver examples!distributed-mpi|hyperpage}{31}
\indexentry{Command line arguments|hyperpage}{32}
\indexentry{\_SAMPLE\_COMPLEX|hyperpage}{33}
\indexentry{Computed vectors|hyperpage}{35}
\indexentry{Aliases|hyperpage}{44}
\indexentry{XMDS2 XML schema|hyperpage}{48}
\indexentry{XML schema|hyperpage}{48}
\indexentry{Reference|hyperpage}{51}
\indexentry{XML Elements|hyperpage}{51}
\indexentry{Script elements|hyperpage}{51}
\indexentry{XML elements!simulation|hyperpage}{51}
\indexentry{XML elements!name (of simulation)|hyperpage}{51}
\indexentry{XML elements!author|hyperpage}{52}
\indexentry{XML elements!description|hyperpage}{52}
\indexentry{XML elements!features|hyperpage}{52}
\indexentry{XML elements!arguments|hyperpage}{53}
\indexentry{XML elements!argument|hyperpage}{54}
\indexentry{XML element attributes!name|hyperpage}{54}
\indexentry{XML element attributes!type|hyperpage}{54}
\indexentry{XML element attributes!default\_value|hyperpage}{54}
\indexentry{XML elements!autovectorise|hyperpage}{54}
\indexentry{XML elements!benchmark|hyperpage}{54}
\indexentry{XML elements!bing|hyperpage}{54}
\indexentry{XML elements!cflags|hyperpage}{54}
\indexentry{XML elements!chunked\_output|hyperpage}{55}
\indexentry{XML elements!diagnostics|hyperpage}{55}
\indexentry{XML elements!error\_check|hyperpage}{55}
\indexentry{XML elements!halt\_non\_finite|hyperpage}{56}
\indexentry{XML elements!fftw|hyperpage}{56}
\indexentry{XML element attributes!plan|hyperpage}{56}
\indexentry{XML elements!globals|hyperpage}{56}
\indexentry{XML elements!openmp|hyperpage}{56}
\indexentry{Single precision|hyperpage}{56}
\indexentry{Double precision|hyperpage}{56}
\indexentry{Precision|hyperpage}{56}
\indexentry{XML elements!precision|hyperpage}{56}
\indexentry{XML elements!validation|hyperpage}{57}
\indexentry{XML element attributes!kind|hyperpage}{57}
\indexentry{XML elements!driver|hyperpage}{58}
\indexentry{XML element attributes!name (driver)|hyperpage}{58}
\indexentry{Drivers!distributed-mpi"|hyperpage}{58}
\indexentry{Drivers!multi-path"|hyperpage}{58}
\indexentry{Drivers!mpi-multi-path"|hyperpage}{58}
\indexentry{Drivers!adaptive-mpi-multi-path"|hyperpage}{58}
\indexentry{XML elements!geometry|hyperpage}{58}
\indexentry{XML elements!propagation\_dimension|hyperpage}{59}
\indexentry{XML elements!transverse\_dimensions|hyperpage}{59}
\indexentry{XML elements!dimension|hyperpage}{59}
\indexentry{XML element attributes!name (dimension)|hyperpage}{59}
\indexentry{XML element attributes!type (dimension)|hyperpage}{59}
\indexentry{XML element attributes!lattice|hyperpage}{59}
\indexentry{XML element attributes!domain|hyperpage}{59}
\indexentry{Aliases|hyperpage}{59}
\indexentry{XML element attributes!aliases|hyperpage}{59}
\indexentry{Vectors!non-local access|hyperpage}{59}
\indexentry{XML element attributes!volume\_prefactor|hyperpage}{59}
\indexentry{XML element attributes!transform|hyperpage}{59}
\indexentry{Aliases|hyperpage}{59}
\indexentry{Transforms!dft|hyperpage}{60}
\indexentry{Boundary conditions (DFT)|hyperpage}{60}
\indexentry{Transforms!dct|hyperpage}{60}
\indexentry{Boundary conditions (DCT)|hyperpage}{61}
\indexentry{Transforms!dst|hyperpage}{61}
\indexentry{Boundary conditions (DST)|hyperpage}{61}
\indexentry{Transforms!bessel|hyperpage}{62}
\indexentry{Boundary conditions (Bessel)|hyperpage}{62}
\indexentry{Boundary conditions|hyperpage}{62}
\indexentry{Transforms!spherical-bessel|hyperpage}{63}
\indexentry{Transforms!hermite-gauss|hyperpage}{64}
\indexentry{XML element attributes!length\_scale|hyperpage}{64}
\indexentry{XML elements!vector|hyperpage}{65}
\indexentry{XML element attributes!name (vector)|hyperpage}{65}
\indexentry{XML element attributes!type (vector)|hyperpage}{65}
\indexentry{XML elements!components|hyperpage}{65}
\indexentry{XML element attributes!initial\_basis (vector)|hyperpage}{65}
\indexentry{XML elements!initialisation|hyperpage}{65}
\indexentry{XML element attributes!name (vector)|hyperpage}{65}
\indexentry{Vectors!non-local access|hyperpage}{65}
\indexentry{Vectors!non-local access|hyperpage}{66}
\indexentry{MPI!non-local vector access|hyperpage}{66}
\indexentry{XML elements!filename|hyperpage}{66}
\indexentry{XML element attributes!kind (initialisation element)|hyperpage}{66}
\indexentry{XML element attributes!geometry\_matching\_mode|hyperpage}{66}
\indexentry{XML elements!dependencies|hyperpage}{67}
\indexentry{XML element attributes!basis (dependencies element)|hyperpage}{67}
\indexentry{XML elements!computed\_vector|hyperpage}{68}
\indexentry{XML elements!evaluation|hyperpage}{68}
\indexentry{XML element attributes!name (computed vector)|hyperpage}{68}
\indexentry{XML element attributes!dimensions (computed vector)|hyperpage}{68}
\indexentry{XML element attributes!type (computed vector)|hyperpage}{68}
\indexentry{XML elements!noise\_vector|hyperpage}{68}
\indexentry{XML element attributes!name (noise vector)|hyperpage}{68}
\indexentry{XML element attributes!dimensions (noise vector)|hyperpage}{68}
\indexentry{XML element attributes!type (noise vector)|hyperpage}{68}
\indexentry{XML element attributes!initial\_basis (noise vector)|hyperpage}{68}
\indexentry{XML element attributes!method|hyperpage}{68}
\indexentry{XML element attributes!seed|hyperpage}{68}
\indexentry{XML element attributes!kind (noise vector)|hyperpage}{68}
\indexentry{Noise!uniform|hyperpage}{69}
\indexentry{Noise!gaussian|hyperpage}{70}
\indexentry{Noise!wiener|hyperpage}{70}
\indexentry{Noise!poissonian|hyperpage}{71}
\indexentry{Noise!jump|hyperpage}{71}
\indexentry{XML elements!sequence|hyperpage}{71}
\indexentry{XML element attributes!cycles|hyperpage}{71}
\indexentry{XML elements!filter|hyperpage}{72}
\indexentry{XML element attributes!name (filter)|hyperpage}{72}
\indexentry{XML elements!integrate|hyperpage}{73}
\indexentry{XML element attributes!interval|hyperpage}{73}
\indexentry{XML element attributes!algorithm|hyperpage}{73}
\indexentry{XML element attributes!steps|hyperpage}{73}
\indexentry{XML element attributes!tolerance|hyperpage}{73}
\indexentry{Integration algorithms!all|hyperpage}{73}
\indexentry{XML elements!samples|hyperpage}{73}
\indexentry{Operators|hyperpage}{73}
\indexentry{XML elements!operators|hyperpage}{73}
\indexentry{XML elements!integration\_vectors|hyperpage}{74}
\indexentry{Vectors!non-local access|hyperpage}{74}
\indexentry{XML elements!operator|hyperpage}{74}
\indexentry{XML element attributes!kind (operator)|hyperpage}{74}
\indexentry{Operators!IP|hyperpage}{74}
\indexentry{Operators!EX|hyperpage}{74}
\indexentry{IP operators|hyperpage}{74}
\indexentry{EX operators|hyperpage}{74}
\indexentry{XML element attributes!constant|hyperpage}{75}
\indexentry{Cross-propagation|hyperpage}{75}
\indexentry{XML element attributes!cross-propagation|hyperpage}{75}
\indexentry{XML elements!boundary\_conditions|hyperpage}{75}
\indexentry{XML element attributes!kind (boundary\_condition element)|hyperpage}{75}
\indexentry{Boundary conditions|hyperpage}{75}
\indexentry{Integration algorithms!semi-implicit (SI)|hyperpage}{76}
\indexentry{Integration algorithms!Runge-Kutta (RK)|hyperpage}{76}
\indexentry{Integration algorithms!adaptive Runge-Kutta (ARK)|hyperpage}{77}
\indexentry{Integration algorithms!Richardson extrapolation|hyperpage}{77}
\indexentry{XML elements!filters|hyperpage}{78}
\indexentry{XML element attributes!where|hyperpage}{78}
\indexentry{XML elements!breakpoint|hyperpage}{78}
\indexentry{XML element attributes!filename (breakpoint element)|hyperpage}{78}
\indexentry{XML element attributes!format (breakpoint element)|hyperpage}{78}
\indexentry{XML elements!output|hyperpage}{79}
\indexentry{XML element attributes!format (output element)|hyperpage}{79}
\indexentry{XML element attributes!filename (output element)|hyperpage}{79}
\indexentry{XML element attributes!format (output element)|hyperpage}{79}
\indexentry{Sampling|hyperpage}{79}
\indexentry{XML elements!sampling\_group|hyperpage}{79}
\indexentry{XML element attributes!basis (sampling\_group element)|hyperpage}{79}
\indexentry{XML element attributes!initial\_sample|hyperpage}{79}
\indexentry{\_lattice|hyperpage}{80}
\indexentry{\_min|hyperpage}{80}
\indexentry{\_max|hyperpage}{80}
\indexentry{\_dx|hyperpage}{80}
\indexentry{XML element attributes!basis (sampling\_group element)|hyperpage}{80}
\indexentry{Modified midpoint method|hyperpage}{80}
\indexentry{Bulirsch-Stoer algorithm|hyperpage}{81}
\indexentry{Bulirsch-Stoer error scaling|hyperpage}{82}
\indexentry{Advanced topics|hyperpage}{83}
\indexentry{Importing data|hyperpage}{85}
\indexentry{Convolutions and Fourier transforms|hyperpage}{88}
\indexentry{Geometry matching mode - loose|hyperpage}{90}
\indexentry{Dimension aliases|hyperpage}{90}
\indexentry{FAQ|hyperpage}{91}
\indexentry{Citing XMDS2|hyperpage}{93}
\indexentry{Bug reports|hyperpage}{93}
\indexentry{Time dependence in vectors|hyperpage}{93}
\indexentry{Grid specification at run-time|hyperpage}{94}
\indexentry{IP versus EX operators|hyperpage}{94}
\indexentry{xsil2graphics2|hyperpage}{104}
\indexentry{Exporting data|hyperpage}{104}
\indexentry{Test scripts|hyperpage}{107}
\indexentry{Documentation format|hyperpage}{109}
\indexentry{XML schema updates|hyperpage}{110}
\indexentry{Adding an integrator|hyperpage}{113}
\indexentry{XMDS2 parsing process|hyperpage}{116}
\indexentry{XMDS2 project directory layout|hyperpage}{128}
\indexentry{Licensing|hyperpage}{129}
\indexentry{GNU General Public License|hyperpage}{131}
\indexentry{GPL|hyperpage}{131}
\indexentry{GNU Free Documentation License|hyperpage}{135}
\indexentry{News|hyperpage}{139}
