btllib
btllib::SeedNtHash Member List

This is the complete list of members for btllib::SeedNtHash, including all inherited members.

forward_hash (defined in btllib::NtHash)btllib::NtHashprotected
get_hash_num() const (defined in btllib::NtHash)btllib::NtHashinline
get_hash_num_per_seed() const (defined in btllib::SeedNtHash)btllib::SeedNtHashinline
get_k() const (defined in btllib::NtHash)btllib::NtHashinline
get_pos() const (defined in btllib::NtHash)btllib::NtHashinline
hash_num (defined in btllib::NtHash)btllib::NtHashprotected
hashes() const (defined in btllib::NtHash)btllib::NtHash
hashes_vector (defined in btllib::NtHash)btllib::NtHashprotected
k (defined in btllib::NtHash)btllib::NtHashprotected
NtHash(const char *seq, size_t seq_len, unsigned k, unsigned hash_num)btllib::NtHashinline
NtHash(const std::string &seq, unsigned k, unsigned hash_num)btllib::NtHashinline
pos (defined in btllib::NtHash)btllib::NtHashprotected
reverse_hash (defined in btllib::NtHash)btllib::NtHashprotected
roll() (defined in btllib::SeedNtHash)btllib::SeedNtHash
SeedNtHash(const char *seq, size_t seq_len, unsigned k, const std::vector< SpacedSeed > &seeds, unsigned hash_num_per_seed) (defined in btllib::SeedNtHash)btllib::SeedNtHashinline
SeedNtHash(const std::string &seq, unsigned k, const std::vector< SpacedSeed > &seeds, unsigned hash_num_per_seed) (defined in btllib::SeedNtHash)btllib::SeedNtHashinline
SeedNtHash(const char *seq, size_t seq_len, unsigned k, const std::vector< std::string > &seeds, unsigned hash_num_per_seed) (defined in btllib::SeedNtHash)btllib::SeedNtHashinline
SeedNtHash(const std::string &seq, unsigned k, const std::vector< std::string > &seeds, unsigned hash_num_per_seed) (defined in btllib::SeedNtHash)btllib::SeedNtHashinline
seq (defined in btllib::NtHash)btllib::NtHashprotected
seq_len (defined in btllib::NtHash)btllib::NtHashprotected