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Class Summary | |
AlignApplet | |
AlignJFrame | Displays a grapical representation of a collection of sequences. |
ColourJFrame | Colour pallette display and editor. |
ColourMenu | Colour menu displayed in a popup menu from the colour display pallette (ColourJFrame). |
Consensus | Calculate a consensus using the same method as 'cons' in the EMBOSS suite. |
GraphicSequenceCollection | This class can be used to get a grapical representation of a collection of sequences. |
Matrix | |
MatrixJFrame | |
PatternJFrame | |
PlotConsensus | |
PrintAlignment | |
PrintAlignmentImage | |
Sequence | Sequence object |
SequenceJPanel | Applet for drawing sequence |
SequenceNameJButton | Draw sequence name |
SequenceProperties | |
SequenceReader | This class reads sequences in FASTA and MSF format. |
SequenceSaver | This class saves sequences in FASTA format. |
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