R/predict.r
dm_predict.Rd
Predict new data points using an existing DiffusionMap. The resulting matrix can be used in the plot method for the DiffusionMap
dm_predict(dm, new_data, ..., verbose = FALSE)
dm | A |
---|---|
new_data | New data points to project into the diffusion map. Can be a matrix, data.frame, ExpressionSet, or SingleCellExperiment. |
... | Passed to |
verbose | Show progress messages? |
A \(nrow(new\_data) \times ncol(eigenvectors(dif))\) matrix of projected diffusion components for the new data.
data(guo) g1 <- guo[, guo$num_cells != 32L] g2 <- guo[, guo$num_cells == 32L] dm <- DiffusionMap(g1) dc2 <- dm_predict(dm, g2) plot(dm, new_dcs = dc2)