Notes on how this package can be tested.
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This package can be tested by running the provided test:

LC_ALL=C R --no-save <<EOT
require("GenomicFeatures") || stop("unable to load GenomicFeatures package")
GenomicFeatures:::.test()
EOT

in order to confirm its integrity.

As it is reported in bug #735548 to successfully run this test you need some
BioConductor databases as preconditions.  Since these are not packaged for
Debian the according tests are removed from the test suite of this package.

If you want to install the as Debian packages you can use:

   svn://anonscm.debian.org/debian-med/trunk/packages/R/r-bioc-txdb.hsapiens.ucsc.hg19.knowngene/trunk/

A further database

   http://bioconductor.org/packages/release/data/annotation/html/BSgenome.Hsapiens.UCSC.hg19.html

will be needed as well but it is not yet packaged.

Finally you would need to re-activate the according tests by moving the
original files from inst/unitTests to the installation directory or you
rebuild this package by deactivating the patch in the series file.

Further important note why it might happen that some tests might fail
[see for complete mail test the Debian Med mailing list archive
 http://lists.alioth.debian.org/pipermail/debian-med-packaging/2014-October/030474.html]:

  Date: Wed, 22 Oct 2014 10:41:45 -0700
  From: Marc Carlson <mcarlson@fhcrc.org>
  Subject: Re: [devteam-bioc] Failed test in GenomicFeatures
  
  Hi Andreas,
  
  This is something that can happen whenever data sources at ensembl are
  updated causing our test of the real ensembl data to become
  temporarily invalid.  We have already updated out packages to reflect
  the new data coming from ensembl.  You can see the build report here:
  
  http://www.bioconductor.org/checkResults/3.0/bioc-LATEST/
  
  And the latest released version of this software is also described
  (and available) here:
  
  http://www.bioconductor.org/packages/3.0/bioc/html/GenomicFeatures.html


 -- Andreas Tille <tille@debian.org>  Thu, 24 Jul 2014 08:35:54 +0200
